XanthoBrowser

1. Visualization Operation Instructions:

a. After accessing the website, click the "OPEN TRACK SELECTOR" button: check the "Reference sequence (Xac Genome)" box to display the genomic sequence data. Check the "Xac Genes" box to display functional genes along with detailed annotations and experimental results (including gene position, direction, name, length, as well as annotation and experimental result data).

b. After making the selections, click outside the subpage area to return to the main website page.

c. You can search for information related to the target location in the search box, such as CP096227.1:1..100 or CP096227.1:5000..5028. You can also use the buttons on the right to zoom in and out of the viewing range.

The website is currently preparing for a version update. In the future, it will be further improved to make data presentation more diverse and user-friendly.

2. Data Description from References:

a. Orthologs in Xcc essential (Reference: Genome-wide identification of fitness determinants in the Xanthomonas campestris bacterial pathogen during early stages of plant infection).

b. Orthologs in Xoo essential (Reference: Establishment of a system for screening and identification of novel bactericide targets in the plant pathogenic bacterium Xanthomonas oryzae pv. oryzae using Tn-seq and SPR).

c. Orthologs in Xhv essential (Reference: In vitro exploration of the Xanthomonas hortorum pv. Vitians genome using transposon insertion sequencing and comparative genomics to discriminate between core and contextual essential genes).